2023

  • Solid-state NMR Application in Lithium Polymer Batteries

    Vestince Balidi Mbayachi – @vestince

    NMR is an exceptional and a practical advanced diagnostic technique for studying energy storage materials. Its accuracy and high resolution make NMR essential for investigating the phase structure and ion mobility of batteries. My presentation focuses on ex-situ characterization of polymer electrolyte in lithium batteries using solid-state NMR.

    Leave a Reply

    Your email address will not be published. Required fields are marked *

  • NMR experiments to study inhibition of enzymes that confer bacterial resistance

    Yara Lins Rocha – @YaraLRocha

    Enzymes belonging to the Carbapenem-Hydrolyzing Class D β-lactamases (CHDL’s) confer bacterial resistance to β-lactam antibiotics and are often associated with outbreaks involving the pathogenic bacteria Acinetobacter baumannii. We report the inhibition of CHDL OXA-143 by the reaction product with meropenem, a carbapenem antibiotic, in addition to describing its effect on protein structure and dynamics. Kinetic 1H-NMR experiments were performed to assess how hMER interferes with the catalytic efficiency of the enzyme against ampicillin and meropenem itself, indicating a clear inhibition. Chemical shift perturbation (CSP) was performed using 15N-HSQC and 15N-TROSY titration experiments. The results indicate that hMER acts as a competitive inhibitor blocking the active site and decreasing the dynamics of essential motifs around the binding site.

    Leave a Reply

    Your email address will not be published. Required fields are marked *

  • Conformational Plasticity of Parallel G-quadruplex – Implications on Duplex-Quadruplex Motifs

    Rajesh Kumar Reddy Sannapureddi – @RR_Sannapureddi

    Parallel G-quadruplexes formed by guanine rich sequences are ubiquitously formed in promoter, telomere regions. Structural and dynamic features associated with them is presented in details from structure survey, solution state NMR studies and MD simulations. Impact of covalently attached duplex on parallel quadruplex discerned from NMR studies are presented.

    Leave a Reply

    Your email address will not be published. Required fields are marked *

  • Altering a protein’s conformational space differentially regulates the host signalling pathway

    Apurva phale – @ApurvaPhale

    Viruses mimic host proteins to evade their immune response. A few baculoviruses do this by mimicking a widely present protein, ubiquitin. Interestingly, this viral protein can differentially regulate the forward and reverse pathways, not by changing the interaction interface but by modulating the protein’s conformational space as observed by eCPMG-NMR.

    Leave a Reply

    Your email address will not be published. Required fields are marked *

  • Study of phosphorus clusters in tau fragment fibrils via multiple quantum solid-state NMR under DNP

    Lokeswara Rao – @lokeswarnmr

    Hyperphosphorylation of the protein tau is a characteristic of neurodegenerative diseases, yet its role is not entirely clear in promoting the tau aggregation propensity. Multiple quantum spin counting experiments were carried out to probe the phosphate species clustering and beta-sheet organization in the fibrils of phosphorylated tau fragments.

    Leave a Reply

    Your email address will not be published. Required fields are marked *

  • Yesterday’s Software for Tomorrow’s Solutions!

    Simon P. Skinner – @nmronline

    Host-guest interactions in MOFs are key to their performance in various applications. Solid-state NMR can probe these interactions, however, with limited sensitivity. I will demonstrate how endogenous metal-ion DNP can tackle this challenge, keeping MOF pores empty for guests, and discuss the effect of MOFs mobility and molecular O2 on the DNP efficacy.

    Leave a Reply

    Your email address will not be published. Required fields are marked *

  • Probing the dynamics of YadA autotransporter in microcrystals and outer membranes hints at requirements for beta-barrel membrane insertion

    Jayasubba Reddy Yarava – @JYarava

    Most types of cells are protected and functionalized by a dense surface layer of glycans, proteoglycans, and glycolipids. This surface represents an under-explored space in structural biology that is almost impossible to recreate in vitro. Here, a realistic picture of YadA dynamics in asymmetric outer membrane environment was investigated using ssNMR and MD simulations.

    Leave a Reply

    Your email address will not be published. Required fields are marked *

  • Structural Elucidation and Remodeling of Fungal Cell Wall by Solid-state NMR

    Isha Gautam

    Understanding cell wall architecture and adaptation mechanism is essential for antifungal drug efficacies. The cell wall of Aspergillus fumigatus is characterized using solid-state NMR (ssNMR) divulged rigid core of chitin, β-1,3-glucan and α-1,3-glucan. Mobile domains contain galactoproteins and α-1,3-glucan. Hydrophobic and stiff cell walls were exploited in response to antifungals.

    Leave a Reply

    Your email address will not be published. Required fields are marked *

  • Imaging and spectroscopic applications in cancer research

    Madhu Basetti – @mbasetti

    We are an imaging core group working in cancer research with preclinical imaging modalities for early detection and prognosis of cancer.

    Leave a Reply

    Your email address will not be published. Required fields are marked *

  • NMRduino: a modular, open-source sub-MHz MR platform

    Michael Tayler – @NMRduino / @mcdtayler

    NMRduino is a sub-MHz NMR spectrometer designed unsparingly for minimum complexity, providing low-entry-barrier-NMR for beginners and those who wish to build custom hardware. Utility ranges from exploration of basic NMR concepts such as phase cycling and coherence selection to advanced experimental control including low-frequency, low-field parahydrogen-induced hyperpolarization and spin decoupling.

    Leave a Reply

    Your email address will not be published. Required fields are marked *